J3_9HMW_035
3D structure
- PDB id
- 9HMW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.25 Å
Loop
- Sequence
- UGGA*UAC*G(G7M)AA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: G7M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9HMW|1|h1|U|1169
9HMW|1|h1|G|1170
9HMW|1|h1|G|1171
9HMW|1|h1|A|1172
*
9HMW|1|h1|U|1471
9HMW|1|h1|A|1472
9HMW|1|h1|C|1473
*
9HMW|1|h1|G|1576
9HMW|1|h1|G7M|1577
9HMW|1|h1|A|1578
9HMW|1|h1|A|1579
Current chains
- Chain h1
- Ribosomal RNA 18S
Nearby chains
- Chain AD
- Small ribosomal subunit protein uS7y
- Chain AF
- Small ribosomal subunit protein uS9z
- Chain BL
- Small ribosomal subunit protein eS19x
- Chain W2
- Transfer RNA; tRNA
- Chain Wa
- Small ribosomal subunit protein uS13z/uS13y/uS13x
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