J3_9HMW_040
3D structure
- PDB id
- 9HMW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.25 Å
Loop
- Sequence
- AGC*GGAC*GUUU
- Length
- 11 nucleotides
- Bulged bases
- 9HMW|1|h1|U|1416, 9HMW|1|h1|U|1417
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9HMW|1|h1|A|1337
9HMW|1|h1|G|1338
9HMW|1|h1|C|1339
*
9HMW|1|h1|G|1389
9HMW|1|h1|G|1390
9HMW|1|h1|A|1391
9HMW|1|h1|C|1392
*
9HMW|1|h1|G|1415
9HMW|1|h1|U|1416
9HMW|1|h1|U|1417
9HMW|1|h1|U|1418
Current chains
- Chain h1
- Ribosomal RNA 18S
Nearby chains
- Chain AD
- Small ribosomal subunit protein uS7y
- Chain AF
- Small ribosomal subunit protein uS9z
- Chain BB
- Small ribosomal subunit protein eS17w
- Chain Ba
- Small ribosomal subunit protein uS10y
- Chain Ca
- Small ribosomal subunit protein uS14z/uS14y/uS14x
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