J3_9HQV_001
3D structure
- PDB id
- 9HQV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the small subunit of the mitochondrial ribosome from Toxoplasma gondii
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.52 Å
Loop
- Sequence
- GUUGGA*UAC*GGAAUC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9HQV|1|SK|G|71
9HQV|1|SK|U|72
9HQV|1|SK|U|73
9HQV|1|SK|G|74
9HQV|1|SK|G|75
9HQV|1|SK|A|76
*
9HQV|1|SM|U|70
9HQV|1|SM|A|71
9HQV|1|SM|C|72
*
9HQV|1|SQ|G|16
9HQV|1|SQ|G|17
9HQV|1|SQ|A|18
9HQV|1|SQ|A|19
9HQV|1|SQ|U|20
9HQV|1|SQ|C|21
Current chains
- Chain SK
- SSU-11
- Chain SM
- SSU-13
- Chain SQ
- SSU-17
Nearby chains
- Chain BB
- mS75
- Chain Be
- Putative ribosomal protein S9
- Chain Bi
- us13m
- Chain SN
- SSU-14
- Chain SP
- SSU-16
- Chain TP
- tRNA E-site
- Chain Yn
- AP2 domain transcription factor AP2IX-6
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