J3_9HYM_017
3D structure
- PDB id
- 9HYM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of WT E.coli ribosome with complexed filament nascent chain at length 34, with mRNA, P-site and A-site tRNAs, and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- CAUC*GUGAUG*CCAUUUAAAG
- Length
- 20 nucleotides
- Bulged bases
- 9HYM|1|b|A|2518, 9HYM|1|b|U|2519
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9HYM|1|b|C|2517
9HYM|1|b|A|2518
9HYM|1|b|U|2519
9HYM|1|b|C|2520
*
9HYM|1|b|G|2545
9HYM|1|b|U|2546
9HYM|1|b|G|2547
9HYM|1|b|A|2548
9HYM|1|b|U|2549
9HYM|1|b|G|2550
*
9HYM|1|b|C|2558
9HYM|1|b|C|2559
9HYM|1|b|A|2560
9HYM|1|b|U|2561
9HYM|1|b|U|2562
9HYM|1|b|U|2563
9HYM|1|b|A|2564
9HYM|1|b|A|2565
9HYM|1|b|A|2566
9HYM|1|b|G|2567
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain d
- 50S ribosomal protein L3
- Chain k
- Large ribosomal subunit protein uL14
- Chain v
- Transfer RNA; tRNA
Coloring options: