J3_9I14_017

3D structure

PDB id

9I14 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES IN HYBRID-PRE STATE

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

CGG*CUGAC*GGACAG

Length

14 nucleotides

Bulged bases

9I14|1|L5|G|4076

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I14|1|L5|C|3937
9I14|1|L5|G|3938
9I14|1|L5|G|3939
*
9I14|1|L5|C|4074
9I14|1|L5|U|4075
9I14|1|L5|G|4076
9I14|1|L5|A|4077
9I14|1|L5|C|4078
*
9I14|1|L5|G|4168
9I14|1|L5|G|4169
9I14|1|L5|A|4170
9I14|1|L5|C|4171
9I14|1|L5|A|4172
9I14|1|L5|G|4173

Current chains

Chain L5

LSU 28S rRNA

Nearby chains

Chain LA

60S ribosomal protein L8

Chain LG

60S ribosomal protein L7a

Chain LN

60S ribosomal protein L15