J3_9I2E_038
3D structure
- PDB id
- 9I2E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NMT1-NAC bound human ribosome (combined translational states)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.95 Å
Loop
- Sequence
- GCCCGGAC*GGGUG*UUAGAUGUC
- Length
- 22 nucleotides
- Bulged bases
- 9I2E|1|S2|G|1274, 9I2E|1|S2|G|1507, 9I2E|1|S2|U|1509
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9I2E|1|S2|G|1270
9I2E|1|S2|C|1271
9I2E|1|S2|C|1272
9I2E|1|S2|C|1273
9I2E|1|S2|G|1274
9I2E|1|S2|G|1275
9I2E|1|S2|A|1276
9I2E|1|S2|C|1277
*
9I2E|1|S2|G|1320
9I2E|1|S2|G|1321
9I2E|1|S2|G|1322
9I2E|1|S2|U|1323
9I2E|1|S2|G|1324
*
9I2E|1|S2|U|1504
9I2E|1|S2|U|1505
9I2E|1|S2|A|1506
9I2E|1|S2|G|1507
9I2E|1|S2|A|1508
9I2E|1|S2|U|1509
9I2E|1|S2|G|1510
9I2E|1|S2|U|1511
9I2E|1|S2|C|1512
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain CB
- Elongation factor 2
- Chain SK
- 40S ribosomal protein S10
- Chain SP
- 40S ribosomal protein S15
- Chain Sd
- 40S ribosomal protein S29
- Chain Sf
- Ubiquitin
Coloring options: