J3_9IOT_018
3D structure
- PDB id
- 9IOT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Escherichia coli hibernating ribosome with RNase I mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GAAC*GUUGAU*AAUGAAC
- Length
- 17 nucleotides
- Bulged bases
- 9IOT|1|A|U|2833, 9IOT|1|A|A|2835
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9IOT|1|A|G|2812
9IOT|1|A|A|2813
9IOT|1|A|A|2814
9IOT|1|A|C|2815
*
9IOT|1|A|G|2831
9IOT|1|A|U|2832
9IOT|1|A|U|2833
9IOT|1|A|G|2834
9IOT|1|A|A|2835
9IOT|1|A|U|2836
*
9IOT|1|A|A|2882
9IOT|1|A|A|2883
9IOT|1|A|U|2884
9IOT|1|A|G|2885
9IOT|1|A|A|2886
9IOT|1|A|A|2887
9IOT|1|A|C|2888
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 3
- Large ribosomal subunit protein bL32
- Chain E
- 50S ribosomal protein L3
- Chain P
- Large ribosomal subunit protein bL17
- Chain U
- 50S ribosomal protein L22
Coloring options: