J3_9J1M_005

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

GUG*CGAGUAG*UGAAUC

Length

16 nucleotides

Bulged bases

9J1M|1|A|U|319, 9J1M|1|A|G|459

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9J1M|1|A|G|318
9J1M|1|A|U|319
9J1M|1|A|G|320
*
9J1M|1|A|C|458
9J1M|1|A|G|459
9J1M|1|A|A|460
9J1M|1|A|G|461
9J1M|1|A|U|462
9J1M|1|A|A|463
9J1M|1|A|G|464
*
9J1M|1|A|U|488
9J1M|1|A|G|489
9J1M|1|A|A|490
9J1M|1|A|A|491
9J1M|1|A|U|492
9J1M|1|A|C|493

Current chains

Chain A

23S rRNA

Nearby chains

Chain H

Large ribosomal subunit protein bL9

Chain X

Large ribosomal subunit protein bL28