J3_9JNS_006

3D structure

PDB id

9JNS (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S precursor - Erm complex (C-II)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

CAAG*CCCAAACC*GGUG

Length

16 nucleotides

Bulged bases

9JNS|1|A|A|1609, 9JNS|1|A|A|1610

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JNS|1|A|C|1306
9JNS|1|A|A|1307
9JNS|1|A|A|1308
9JNS|1|A|G|1309
*
9JNS|1|A|C|1605
9JNS|1|A|C|1606
9JNS|1|A|C|1607
9JNS|1|A|A|1608
9JNS|1|A|A|1609
9JNS|1|A|A|1610
9JNS|1|A|C|1611
9JNS|1|A|C|1612
*
9JNS|1|A|G|1619
9JNS|1|A|G|1620
9JNS|1|A|U|1621
9JNS|1|A|G|1622

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain S

50S ribosomal protein L22