J3_9JNS_009

3D structure

PDB id

9JNS (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S precursor - Erm complex (C-II)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

GAAC*GUUGAU*AAUGAAC

Length

17 nucleotides

Bulged bases

9JNS|1|A|U|2833, 9JNS|1|A|A|2835

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JNS|1|A|G|2812
9JNS|1|A|A|2813
9JNS|1|A|A|2814
9JNS|1|A|C|2815
*
9JNS|1|A|G|2831
9JNS|1|A|U|2832
9JNS|1|A|U|2833
9JNS|1|A|G|2834
9JNS|1|A|A|2835
9JNS|1|A|U|2836
*
9JNS|1|A|A|2882
9JNS|1|A|A|2883
9JNS|1|A|U|2884
9JNS|1|A|G|2885
9JNS|1|A|A|2886
9JNS|1|A|A|2887
9JNS|1|A|C|2888

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3

Chain N

50S ribosomal protein L17

Chain S

50S ribosomal protein L22