J3_9JPM_012

3D structure

PDB id

9JPM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Lys(mcm5s2U34) and mRNA(AAA)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

GAAG*UGUGCC*GAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JPM|1|A|G|1003
9JPM|1|A|A|1004
9JPM|1|A|A|1005
9JPM|1|A|G|1006
*
9JPM|1|A|U|1023
9JPM|1|A|G|1024
9JPM|1|A|U|1025
9JPM|1|A|G|1026
9JPM|1|A|C|1027
9JPM|1|A|C|1028
*
9JPM|1|A|G|1034
9JPM|1|A|A|1035
9JPM|1|A|A|1036
9JPM|1|A|C|1037

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

30S ribosomal protein S14