J3_9JSR_006

3D structure

PDB id

9JSR (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S precursor - Erm complex (C-I)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CAAG*CCCAAACC*GGUG

Length

16 nucleotides

Bulged bases

9JSR|1|A|C|1607, 9JSR|1|A|A|1609, 9JSR|1|A|A|1610

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JSR|1|A|C|1306
9JSR|1|A|A|1307
9JSR|1|A|A|1308
9JSR|1|A|G|1309
*
9JSR|1|A|C|1605
9JSR|1|A|C|1606
9JSR|1|A|C|1607
9JSR|1|A|A|1608
9JSR|1|A|A|1609
9JSR|1|A|A|1610
9JSR|1|A|C|1611
9JSR|1|A|C|1612
*
9JSR|1|A|G|1619
9JSR|1|A|G|1620
9JSR|1|A|U|1621
9JSR|1|A|G|1622

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34