J3_9JSR_009

3D structure

PDB id

9JSR (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S precursor - Erm complex (C-I)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GAAC*GUUGAU*AAUGAAC

Length

17 nucleotides

Bulged bases

9JSR|1|A|U|2833, 9JSR|1|A|A|2835, 9JSR|1|A|U|2884, 9JSR|1|A|G|2885

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JSR|1|A|G|2812
9JSR|1|A|A|2813
9JSR|1|A|A|2814
9JSR|1|A|C|2815
*
9JSR|1|A|G|2831
9JSR|1|A|U|2832
9JSR|1|A|U|2833
9JSR|1|A|G|2834
9JSR|1|A|A|2835
9JSR|1|A|U|2836
*
9JSR|1|A|A|2882
9JSR|1|A|A|2883
9JSR|1|A|U|2884
9JSR|1|A|G|2885
9JSR|1|A|A|2886
9JSR|1|A|A|2887
9JSR|1|A|C|2888

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3

Chain N

50S ribosomal protein L17

Chain S

50S ribosomal protein L22