J3_9K0Z_004

3D structure

PDB id

9K0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 70S ribosome complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

UGG*CUAGA*UGACG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K0Z|1|A|U|566
9K0Z|1|A|G|567
9K0Z|1|A|G|568
*
9K0Z|1|A|C|631
9K0Z|1|A|U|632
9K0Z|1|A|A|633
9K0Z|1|A|G|634
9K0Z|1|A|A|635
*
9K0Z|1|A|U|731
9K0Z|1|A|G|732
9K0Z|1|A|A|733
9K0Z|1|A|C|734
9K0Z|1|A|G|735

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain H

Small ribosomal subunit protein uS8

Chain L

Small ribosomal subunit protein uS12

Chain O

Small ribosomal subunit protein uS15

Chain Q

Small ribosomal subunit protein uS17