J3_9K10_005

3D structure

PDB id

9K10 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 50S ribosome subunit complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUG*CGAGUAG*UGAAUC

Length

16 nucleotides

Bulged bases

9K10|1|A|U|318, 9K10|1|A|G|458

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K10|1|A|G|317
9K10|1|A|U|318
9K10|1|A|G|319
*
9K10|1|A|C|457
9K10|1|A|G|458
9K10|1|A|A|459
9K10|1|A|G|460
9K10|1|A|U|461
9K10|1|A|A|462
9K10|1|A|G|463
*
9K10|1|A|U|487
9K10|1|A|G|488
9K10|1|A|A|489
9K10|1|A|A|490
9K10|1|A|U|491
9K10|1|A|C|492

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain H

50S ribosomal protein L9

Chain Y

50S ribosomal protein L28