J3_9K10_006

3D structure

PDB id

9K10 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 50S ribosome subunit complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UAUCUUU*AGG*CUUGAUGG

Length

18 nucleotides

Bulged bases

9K10|1|A|U|330, 9K10|1|A|U|445

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K10|1|A|U|325
9K10|1|A|A|326
9K10|1|A|U|327
9K10|1|A|C|328
9K10|1|A|U|329
9K10|1|A|U|330
9K10|1|A|U|331
*
9K10|1|A|A|350
9K10|1|A|G|351
9K10|1|A|G|352
*
9K10|1|A|C|443
9K10|1|A|U|444
9K10|1|A|U|445
9K10|1|A|G|446
9K10|1|A|A|447
9K10|1|A|U|448
9K10|1|A|G|449
9K10|1|A|G|450

Current chains

Chain A

23S ribosomal RNA

Nearby chains