J3_9KMT_008
3D structure
- PDB id
- 9KMT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bat SARSr-CoV RaTG15 Nsp1 bound to the Human 40S Ribosomal subunit-State1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.81 Å
Loop
- Sequence
- UCUGGC*GGACAAG*CCCGAGAUUGA
- Length
- 24 nucleotides
- Bulged bases
- 9KMT|1|2|U|1477
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9KMT|1|2|U|1390
9KMT|1|2|C|1391
9KMT|1|2|U|1392
9KMT|1|2|G|1393
9KMT|1|2|G|1394
9KMT|1|2|C|1395
*
9KMT|1|2|G|1450
9KMT|1|2|G|1451
9KMT|1|2|A|1452
9KMT|1|2|C|1453
9KMT|1|2|A|1454
9KMT|1|2|A|1455
9KMT|1|2|G|1456
*
9KMT|1|2|C|1470
9KMT|1|2|C|1471
9KMT|1|2|C|1472
9KMT|1|2|G|1473
9KMT|1|2|A|1474
9KMT|1|2|G|1475
9KMT|1|2|A|1476
9KMT|1|2|U|1477
9KMT|1|2|U|1478
9KMT|1|2|G|1479
9KMT|1|2|A|1480
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain D
- Small ribosomal subunit protein uS3
- Chain F
- Small ribosomal subunit protein uS7
- Chain Q
- Small ribosomal subunit protein uS9
- Chain R
- Small ribosomal subunit protein eS17
- Chain U
- Small ribosomal subunit protein uS10
- Chain c
- Small ribosomal subunit protein eS28
- Chain d
- Small ribosomal subunit protein uS14
- Chain g
- Small ribosomal subunit protein RACK1
Coloring options: