J3_9KMU_007
3D structure
- PDB id
- 9KMU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bat SARSr-CoV RaTG15 Nsp1 bound to the Human 40S Ribosomal subunit-State2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.87 Å
Loop
- Sequence
- AGUGGAGCCUGCGGCUUAAUUUGACUCAACACGGGAAACCUCACCC*GGGCUGCACGCGCGCUAC*GGAAUU
- Length
- 70 nucleotides
- Bulged bases
- 9KMU|1|2|U|1225, 9KMU|1|2|A|1246, 9KMU|1|2|U|1248, 9KMU|1|2|C|1249, 9KMU|1|2|A|1250, 9KMU|1|2|A|1253, 9KMU|1|2|G|1255, 9KMU|1|2|G|1256, 9KMU|1|2|G|1257, 9KMU|1|2|A|1258, 9KMU|1|2|A|1260, 9KMU|1|2|U|1263, 9KMU|1|2|A|1640, 9KMU|1|2|U|1642
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9KMU|1|2|A|1223
9KMU|1|2|G|1224
9KMU|1|2|U|1225
9KMU|1|2|G|1226
9KMU|1|2|G|1227
9KMU|1|2|A|1228
9KMU|1|2|G|1229
9KMU|1|2|C|1230
9KMU|1|2|C|1231
9KMU|1|2|U|1232
9KMU|1|2|G|1233
9KMU|1|2|C|1234
9KMU|1|2|G|1235
9KMU|1|2|G|1236
9KMU|1|2|C|1237
9KMU|1|2|U|1238
9KMU|1|2|U|1239
9KMU|1|2|A|1240
9KMU|1|2|A|1241
9KMU|1|2|U|1242
9KMU|1|2|U|1243
9KMU|1|2|U|1244
9KMU|1|2|G|1245
9KMU|1|2|A|1246
9KMU|1|2|C|1247
9KMU|1|2|U|1248
9KMU|1|2|C|1249
9KMU|1|2|A|1250
9KMU|1|2|A|1251
9KMU|1|2|C|1252
9KMU|1|2|A|1253
9KMU|1|2|C|1254
9KMU|1|2|G|1255
9KMU|1|2|G|1256
9KMU|1|2|G|1257
9KMU|1|2|A|1258
9KMU|1|2|A|1259
9KMU|1|2|A|1260
9KMU|1|2|C|1261
9KMU|1|2|C|1262
9KMU|1|2|U|1263
9KMU|1|2|C|1264
9KMU|1|2|A|1265
9KMU|1|2|C|1266
9KMU|1|2|C|1267
9KMU|1|2|C|1268
*
9KMU|1|2|G|1515
9KMU|1|2|G|1516
9KMU|1|2|G|1517
9KMU|1|2|C|1518
9KMU|1|2|U|1519
9KMU|1|2|G|1520
9KMU|1|2|C|1521
9KMU|1|2|A|1522
9KMU|1|2|C|1523
9KMU|1|2|G|1524
9KMU|1|2|C|1525
9KMU|1|2|G|1526
9KMU|1|2|C|1527
9KMU|1|2|G|1528
9KMU|1|2|C|1529
9KMU|1|2|U|1530
9KMU|1|2|A|1531
9KMU|1|2|C|1532
*
9KMU|1|2|G|1638
9KMU|1|2|G|1639
9KMU|1|2|A|1640
9KMU|1|2|A|1641
9KMU|1|2|U|1642
9KMU|1|2|U|1643
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain F
- Small ribosomal subunit protein uS7
- Chain K
- Small ribosomal subunit protein eS10
- Chain P
- Small ribosomal subunit protein uS19
- Chain Q
- Small ribosomal subunit protein uS9
- Chain S
- Small ribosomal subunit protein uS13
- Chain T
- Small ribosomal subunit protein eS19
- Chain U
- Small ribosomal subunit protein uS10
- Chain d
- Small ribosomal subunit protein uS14
- Chain f
- Small ribosomal subunit protein eS31
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