J3_9KMV_008
3D structure
- PDB id
- 9KMV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SARSr-MpCoV-GX Nsp1 bound to the Human 40S Ribosomal subunit-State1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- GUUCUUAG*CGAGACU*AGCAAUAAC
- Length
- 24 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9KMV|1|2|G|1338
9KMV|1|2|U|1339
9KMV|1|2|U|1340
9KMV|1|2|C|1341
9KMV|1|2|U|1342
9KMV|1|2|U|1343
9KMV|1|2|A|1344
9KMV|1|2|G|1345
*
9KMV|1|2|C|1384
9KMV|1|2|G|1385
9KMV|1|2|A|1386
9KMV|1|2|G|1387
9KMV|1|2|A|1388
9KMV|1|2|C|1389
9KMV|1|2|U|1390
*
9KMV|1|2|A|1480
9KMV|1|2|G|1481
9KMV|1|2|C|1482
9KMV|1|2|A|1483
9KMV|1|2|A|1484
9KMV|1|2|U|1485
9KMV|1|2|A|1486
9KMV|1|2|A|1487
9KMV|1|2|C|1488
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain C
- Small ribosomal subunit protein uS5
- Chain D
- Small ribosomal subunit protein uS3
- Chain Q
- Small ribosomal subunit protein uS9
- Chain R
- Small ribosomal subunit protein eS17
- Chain U
- Small ribosomal subunit protein uS10
- Chain d
- Small ribosomal subunit protein uS14
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