J3_9KMY_009
3D structure
- PDB id
- 9KMY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bat MERSr-CoV NeoCoV Nsp1 bound to the Human 40S Ribosomal subunit-State2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CUGGCAUGC*GAGGGACAAG*CCCGAGAUUG
- Length
- 29 nucleotides
- Bulged bases
- 9KMY|1|2|U|1397, 9KMY|1|2|U|1477
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9KMY|1|2|C|1391
9KMY|1|2|U|1392
9KMY|1|2|G|1393
9KMY|1|2|G|1394
9KMY|1|2|C|1395
9KMY|1|2|A|1396
9KMY|1|2|U|1397
9KMY|1|2|G|1398
9KMY|1|2|C|1399
*
9KMY|1|2|G|1447
9KMY|1|2|A|1448
9KMY|1|2|G|1449
9KMY|1|2|G|1450
9KMY|1|2|G|1451
9KMY|1|2|A|1452
9KMY|1|2|C|1453
9KMY|1|2|A|1454
9KMY|1|2|A|1455
9KMY|1|2|G|1456
*
9KMY|1|2|C|1470
9KMY|1|2|C|1471
9KMY|1|2|C|1472
9KMY|1|2|G|1473
9KMY|1|2|A|1474
9KMY|1|2|G|1475
9KMY|1|2|A|1476
9KMY|1|2|U|1477
9KMY|1|2|U|1478
9KMY|1|2|G|1479
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain D
- Small ribosomal subunit protein uS3
- Chain F
- Small ribosomal subunit protein uS7
- Chain Q
- Small ribosomal subunit protein uS9
- Chain R
- Small ribosomal subunit protein eS17
- Chain U
- Small ribosomal subunit protein uS10
- Chain c
- Small ribosomal subunit protein eS28
- Chain d
- Small ribosomal subunit protein uS14
- Chain g
- Small ribosomal subunit protein RACK1
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