J3_9KO9_001
3D structure
- PDB id
- 9KO9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of PsCas9-sgRNA binary complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UUAU*AUGAAGU*AG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9KO9|1|B|U|30
9KO9|1|B|U|31
9KO9|1|B|A|32
9KO9|1|B|U|33
*
9KO9|1|B|A|46
9KO9|1|B|U|47
9KO9|1|B|G|48
9KO9|1|B|A|49
9KO9|1|B|A|50
9KO9|1|B|G|51
9KO9|1|B|U|52
*
9KO9|1|B|A|66
9KO9|1|B|G|67
Current chains
- Chain B
- RNA (131-MER)
Nearby chains
- Chain A
- CRISPR-associated endonuclease Cas9
Coloring options: