J3_9LMF_002

3D structure

PDB id

9LMF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Streptococcus agalactiae GOLLD RNA 3' domain decamer

Experimental method

ELECTRON MICROSCOPY

Resolution

3.93 Å

Loop

Sequence

UUAC*GUGGAUAAA*UGAAAGA

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9LMF|1|B|U|620
9LMF|1|B|U|621
9LMF|1|B|A|622
9LMF|1|B|C|623
*
9LMF|1|B|G|638
9LMF|1|B|U|639
9LMF|1|B|G|640
9LMF|1|B|G|641
9LMF|1|B|A|642
9LMF|1|B|U|643
9LMF|1|B|A|644
9LMF|1|B|A|645
9LMF|1|B|A|646
*
9LMF|1|B|U|666
9LMF|1|B|G|667
9LMF|1|B|A|668
9LMF|1|B|A|669
9LMF|1|B|A|670
9LMF|1|B|G|671
9LMF|1|B|A|672

Current chains

Chain B

RNA (700-MER)

Nearby chains