J3_9M0P_005

3D structure

PDB id

9M0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of human 80S ribosome in complex with montanine

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GCGCAGUCC*GGUGC*GACGUC

Length

20 nucleotides

Bulged bases

9M0P|1|L5|G|703, 9M0P|1|L5|G|1296

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9M0P|1|L5|G|448
9M0P|1|L5|C|449
9M0P|1|L5|G|450
9M0P|1|L5|C|451
9M0P|1|L5|A|452
9M0P|1|L5|G|453
9M0P|1|L5|U|454
9M0P|1|L5|C|455
9M0P|1|L5|C|456
*
9M0P|1|L5|G|700
9M0P|1|L5|G|701
9M0P|1|L5|U|702
9M0P|1|L5|G|703
9M0P|1|L5|C|704
*
9M0P|1|L5|G|1293
9M0P|1|L5|A|1294
9M0P|1|L5|C|1295
9M0P|1|L5|G|1296
9M0P|1|L5|U|1297
9M0P|1|L5|C|1298

Current chains

Chain L5

28S ribosomal RNA|HOMO SAPIENS

Nearby chains

Chain LE

60S ribosomal protein L6

Chain Le

60S ribosomal protein L32

Chain Lf

60S ribosomal protein L35a