J3_9M0P_012

3D structure

PDB id

9M0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of human 80S ribosome in complex with montanine

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GGAGAUG*CAGU*AGGGUGUAAAUCUC

Length

25 nucleotides

Bulged bases

9M0P|1|L5|C|2768, 9M0P|1|L5|U|2769

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9M0P|1|L5|G|2549
9M0P|1|L5|G|2550
9M0P|1|L5|A|2551
9M0P|1|L5|G|2552
9M0P|1|L5|A|2553
9M0P|1|L5|U|2554
9M0P|1|L5|G|2555
*
9M0P|1|L5|C|2572
9M0P|1|L5|A|2573
9M0P|1|L5|G|2574
9M0P|1|L5|U|2575
*
9M0P|1|L5|A|2757
9M0P|1|L5|G|2758
9M0P|1|L5|G|2759
9M0P|1|L5|G|2760
9M0P|1|L5|U|2761
9M0P|1|L5|G|2762
9M0P|1|L5|U|2763
9M0P|1|L5|A|2764
9M0P|1|L5|A|2765
9M0P|1|L5|A|2766
9M0P|1|L5|U|2767
9M0P|1|L5|C|2768
9M0P|1|L5|U|2769
9M0P|1|L5|C|2770

Current chains

Chain L5

28S ribosomal RNA|HOMO SAPIENS

Nearby chains

Chain LZ

60S ribosomal protein L27

Chain Lg

60S ribosomal protein L34