J3_9MME_014

3D structure

PDB id

9MME (explore in PDB, NAKB, or RNA 3D Hub)

Description

ROOLfirm-octamer-wild type

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

AGCAAUAGACGC*GAGUAAG*UAAAGCCAACAAU

Length

32 nucleotides

Bulged bases

9MME|1|s|C|237

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MME|1|s|A|235
9MME|1|s|G|236
9MME|1|s|C|237
9MME|1|s|A|238
9MME|1|s|A|239
9MME|1|s|U|240
9MME|1|s|A|241
9MME|1|s|G|242
9MME|1|s|A|243
9MME|1|s|C|244
9MME|1|s|G|245
9MME|1|s|C|246
*
9MME|1|s|G|258
9MME|1|s|A|259
9MME|1|s|G|260
9MME|1|s|U|261
9MME|1|s|A|262
9MME|1|s|A|263
9MME|1|s|G|264
*
9MME|1|s|U|303
9MME|1|s|A|304
9MME|1|s|A|305
9MME|1|s|A|306
9MME|1|s|G|307
9MME|1|s|C|308
9MME|1|s|C|309
9MME|1|s|A|310
9MME|1|s|A|311
9MME|1|s|C|312
9MME|1|s|A|313
9MME|1|s|A|314
9MME|1|s|U|315

Current chains

Chain s

RNA (523-MER)

Nearby chains

Chain o

ROOL RNA

Chain w

ROOL RNA