J3_9MNC_002
3D structure
- PDB id
- 9MNC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome bound to small molecule SW393071
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.33 Å
Loop
- Sequence
- CA*UUGAAAAGAAC*GAGUUCAAGAGGGCG
- Length
- 28 nucleotides
- Bulged bases
- 9MNC|1|L5|G|409, 9MNC|1|L5|G|413
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9MNC|1|L1|C|19
9MNC|1|L1|A|20
*
9MNC|1|L5|U|380
9MNC|1|L5|U|381
9MNC|1|L5|G|382
9MNC|1|L5|A|383
9MNC|1|L5|A|384
9MNC|1|L5|A|385
9MNC|1|L5|A|386
9MNC|1|L5|G|387
9MNC|1|L5|A|388
9MNC|1|L5|A|389
9MNC|1|L5|C|390
*
9MNC|1|L5|G|401
9MNC|1|L5|A|402
9MNC|1|L5|G|403
9MNC|1|L5|U|404
9MNC|1|L5|U|405
9MNC|1|L5|C|406
9MNC|1|L5|A|407
9MNC|1|L5|A|408
9MNC|1|L5|G|409
9MNC|1|L5|A|410
9MNC|1|L5|G|411
9MNC|1|L5|G|412
9MNC|1|L5|G|413
9MNC|1|L5|C|414
9MNC|1|L5|G|415
Current chains
- Chain L1
- 5.8S rRNA
- Chain L5
- 28S rRNA
Nearby chains
- Chain LC
- Large ribosomal subunit protein uL4
- Chain LE
- Large ribosomal subunit protein uL24
- Chain LU
- Large ribosomal subunit protein eL39
- Chain Lh
- Large ribosomal subunit protein uL22
Coloring options: