J3_9MNC_004
3D structure
- PDB id
- 9MNC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome bound to small molecule SW393071
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.33 Å
Loop
- Sequence
- AC*GAGAAUU*ACACU
- Length
- 14 nucleotides
- Bulged bases
- 9MNC|1|L1|A|62
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9MNC|1|L1|A|44
9MNC|1|L1|C|45
*
9MNC|1|L1|G|58
9MNC|1|L1|A|59
9MNC|1|L1|G|60
9MNC|1|L1|A|61
9MNC|1|L1|A|62
9MNC|1|L1|U|63
9MNC|1|L1|U|64
*
9MNC|1|L1|A|95
9MNC|1|L1|C|96
9MNC|1|L1|A|97
9MNC|1|L1|C|98
9MNC|1|L1|U|99
Current chains
- Chain L1
- 5.8S rRNA
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain LO
- Large ribosomal subunit protein uL29
- Chain LP
- Large ribosomal subunit protein eL37
- Chain LU
- Large ribosomal subunit protein eL39
- Chain Ln
- Large ribosomal subunit protein uL23
Coloring options: