J3_9MR4_025
3D structure
- PDB id
- 9MR4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NAC: Ribosome nascent chain complex(Oxa1L)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- AG*CGCAAAU*AGU
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9MR4_025 not in the Motif Atlas
- Geometric match to J3_8GLP_040
- Geometric discrepancy: 0.0712
- The information below is about J3_8GLP_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_58657.4
- Basepair signature
- cWW-cWW-cSW-cWW-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
9MR4|1|K|A|40
9MR4|1|K|G|41
*
9MR4|1|K|C|481
9MR4|1|K|G|482
9MR4|1|K|C|483
9MR4|1|K|A|484
9MR4|1|K|A|485
9MR4|1|K|A|486
9MR4|1|K|U|487
*
9MR4|1|K|A|512
9MR4|1|K|G|513
9MR4|1|K|U|514
Current chains
- Chain K
- 18S rRNA
Nearby chains
- Chain DD
- Ribosomal protein S9 (Predicted)
- Chain VV
- uS12
Coloring options: