J3_9MR4_033
3D structure
- PDB id
- 9MR4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NAC: Ribosome nascent chain complex(Oxa1L)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- UGGA*UAC*GGAA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9MR4_033 not in the Motif Atlas
- Homologous match to J3_9PN5_036
- Geometric discrepancy: 0.0934
- The information below is about J3_9PN5_036
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_44359.4
- Basepair signature
- cWW-tSH-cWW-F-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
9MR4|1|K|U|1225
9MR4|1|K|G|1226
9MR4|1|K|G|1227
9MR4|1|K|A|1228
*
9MR4|1|K|U|1530
9MR4|1|K|A|1531
9MR4|1|K|C|1532
*
9MR4|1|K|G|1638
9MR4|1|K|G|1639
9MR4|1|K|A|1640
9MR4|1|K|A|1641
Current chains
- Chain K
- 18S rRNA
Nearby chains
- Chain 2
- Transfer RNA; tRNA
- Chain II
- uS13
- Chain PP
- eS19
- Chain UU
- uS9
- Chain y
- Ribosomal protein S5
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