J3_9MTP_030

3D structure

PDB id

9MTP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.40A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

9MTP|1|1a|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MTP|1|1a|C|990
9MTP|1|1a|U|991
9MTP|1|1a|U|992
9MTP|1|1a|G|993
9MTP|1|1a|A|994
9MTP|1|1a|C|995
9MTP|1|1a|A|996
9MTP|1|1a|U|997
*
9MTP|1|1a|A|1044
9MTP|1|1a|C|1045
9MTP|1|1a|A|1046
9MTP|1|1a|G|1047
*
9MTP|1|1a|C|1210
9MTP|1|1a|U|1211
9MTP|1|1a|U|1212
9MTP|1|1a|A|1213
9MTP|1|1a|C|1214
9MTP|1|1a|G|1215

Current chains

Chain 1a

16S Ribosomal RNA

Nearby chains

Chain 1n

30S ribosomal protein S14 type Z

Chain 1w

Peptide chain release factor 1