3D structure

PDB id
9MTP (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.40A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.4 Å

Loop

Sequence
GGAAC*GGUGCC*GGAGCC
Length
17 nucleotides
Bulged bases
9MTP|1|1a|C|1027
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9MTP|1|1a|G|1002
9MTP|1|1a|G|1003
9MTP|1|1a|A|1004
9MTP|1|1a|A|1005
9MTP|1|1a|C|1006
*
9MTP|1|1a|G|1023
9MTP|1|1a|G|1024
9MTP|1|1a|U|1025
9MTP|1|1a|G|1026
9MTP|1|1a|C|1027
9MTP|1|1a|C|1028
*
9MTP|1|1a|G|1033
9MTP|1|1a|G|1034
9MTP|1|1a|A|1035
9MTP|1|1a|G|1036
9MTP|1|1a|C|1037
9MTP|1|1a|C|1038

Current chains

Chain 1a
16S Ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:

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