J3_9MTT_009

3D structure

PDB id

9MTT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site deacylated-tRNAcys at 2.60A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

GGAG*CUUUAAAG*CAC

Length

15 nucleotides

Bulged bases

9MTT|1|1A|U|1083

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MTT|1|1A|G|1055
9MTT|1|1A|G|1056
9MTT|1|1A|A|1057
9MTT|1|1A|G|1058
*
9MTT|1|1A|C|1080
9MTT|1|1A|U|1081
9MTT|1|1A|U|1082
9MTT|1|1A|U|1083
9MTT|1|1A|A|1084
9MTT|1|1A|A|1085
9MTT|1|1A|A|1086
9MTT|1|1A|G|1087
*
9MTT|1|1A|C|1102
9MTT|1|1A|A|1103
9MTT|1|1A|C|1104

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 19

50S ribosomal protein L36