J3_9N2B_012

3D structure

PDB id

9N2B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsB ribosome (BBB-70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GAAG*UGUGC*GAAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N2B|1|16|G|1003
9N2B|1|16|A|1004
9N2B|1|16|A|1005
9N2B|1|16|G|1006
*
9N2B|1|16|U|1023
9N2B|1|16|G|1024
9N2B|1|16|U|1025
9N2B|1|16|G|1026
9N2B|1|16|C|1027
*
9N2B|1|16|G|1034
9N2B|1|16|A|1035
9N2B|1|16|A|1036
9N2B|1|16|C|1037

Current chains

Chain 16

16S ribosomal RNA (rRNA) from the rrnB operon

Nearby chains

Chain SN

30S ribosomal protein S14