3D structure

PDB id
9N6Y (explore in PDB, NAKB, or RNA 3D Hub)
Description
SSU processome maturation and disassembly, State C
Experimental method
ELECTRON MICROSCOPY
Resolution
3.65 Å

Loop

Sequence
UGA*UAAUA*UA
Length
10 nucleotides
Bulged bases
9N6Y|1|L1|U|864
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9N6Y|1|L1|U|633
9N6Y|1|L1|G|634
9N6Y|1|L1|A|635
*
9N6Y|1|L1|U|861
9N6Y|1|L1|A|862
9N6Y|1|L1|A|863
9N6Y|1|L1|U|864
9N6Y|1|L1|A|865
*
9N6Y|1|L1|U|965
9N6Y|1|L1|A|966

Current chains

Chain L1
18S rRNA

Nearby chains

Chain L7
40S ribosomal protein S7-A
Chain LE
40S ribosomal protein S22-A
Chain NE
Protein FAF1
Chain NF
40S ribosomal protein S13
Chain NK
KRR1 small subunit processome component
Chain NQ
40S ribosomal protein S27-A

Coloring options:

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