J3_9N76_001

3D structure

PDB id

9N76 (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State J

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

AGAUUAAG*CGCGCAAAU*AGU

Length

20 nucleotides

Bulged bases

9N76|1|L1|U|45, 9N76|1|L1|A|47, 9N76|1|L1|C|433, 9N76|1|L1|A|436, 9N76|1|L1|A|437

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N76|1|L1|A|41
9N76|1|L1|G|42
9N76|1|L1|A|43
9N76|1|L1|U|44
9N76|1|L1|U|45
9N76|1|L1|A|46
9N76|1|L1|A|47
9N76|1|L1|G|48
*
9N76|1|L1|C|431
9N76|1|L1|G|432
9N76|1|L1|C|433
9N76|1|L1|G|434
9N76|1|L1|C|435
9N76|1|L1|A|436
9N76|1|L1|A|437
9N76|1|L1|A|438
9N76|1|L1|U|439
*
9N76|1|L1|A|464
9N76|1|L1|G|465
9N76|1|L1|U|466

Current chains

Chain L1

18S rRNA

Nearby chains

Chain L9

40S ribosomal protein S9-A

Chain NS

Probable ATP-dependent RNA helicase DHR1

Chain SI

Ribosome biogenesis protein BMS1

Chain SR

40S ribosomal protein S23-A