J3_9N76_007

3D structure

PDB id

9N76 (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State J

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

GA*UUG*CCGCC

Length

10 nucleotides

Bulged bases

9N76|1|L1|U|1628, 9N76|1|L1|C|1639

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N76|1|L1|G|1150
9N76|1|L1|A|1151
*
9N76|1|L1|U|1627
9N76|1|L1|U|1628
9N76|1|L1|G|1629
*
9N76|1|L1|C|1636
9N76|1|L1|C|1637
9N76|1|L1|G|1638
9N76|1|L1|C|1639
9N76|1|L1|C|1640

Current chains

Chain L1

18S rRNA

Nearby chains

Chain LO

Periodic tryptophan protein 2

Chain LQ

U3 small nucleolar RNA-associated protein 12

Chain LR

U3 small nucleolar RNA-associated protein 13

Chain NA

U3 small nucleolar RNA-associated protein MPP10