J3_9N78_004

3D structure

PDB id

9N78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State L

Experimental method

ELECTRON MICROSCOPY

Resolution

4.17 Å

Loop

Sequence

AGAG*CAG*CGAAU

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N78|1|L1|A|760
9N78|1|L1|G|761
9N78|1|L1|A|762
9N78|1|L1|G|763
*
9N78|1|L1|C|773
9N78|1|L1|A|774
9N78|1|L1|G|775
*
9N78|1|L1|C|786
9N78|1|L1|G|787
9N78|1|L1|A|788
9N78|1|L1|A|789
9N78|1|L1|U|790

Current chains

Chain L1

18S rRNA

Nearby chains

Chain L4

40S ribosomal protein S4-A

Chain L9

40S ribosomal protein S9-A

Chain LF

40S ribosomal protein S24-A