J3_9N79_002

3D structure

PDB id

9N79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State M

Experimental method

ELECTRON MICROSCOPY

Resolution

3.93 Å

Loop

Sequence

AGAUAAAAAAUCAAUG*CUCUUUG*CAU

Length

26 nucleotides

Bulged bases

9N79|1|L1|U|240

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N79|1|L1|A|213
9N79|1|L1|G|214
9N79|1|L1|A|215
9N79|1|L1|U|216
9N79|1|L1|A|217
9N79|1|L1|A|218
9N79|1|L1|A|219
9N79|1|L1|A|220
9N79|1|L1|A|221
9N79|1|L1|A|222
9N79|1|L1|U|223
9N79|1|L1|C|224
9N79|1|L1|A|225
9N79|1|L1|A|226
9N79|1|L1|U|227
9N79|1|L1|G|228
*
9N79|1|L1|C|237
9N79|1|L1|U|238
9N79|1|L1|C|239
9N79|1|L1|U|240
9N79|1|L1|U|241
9N79|1|L1|U|242
9N79|1|L1|G|243
*
9N79|1|L1|C|250
9N79|1|L1|A|251
9N79|1|L1|U|252

Current chains

Chain L1

18S rRNA

Nearby chains

Chain L4

40S ribosomal protein S4-A

Chain L6

40S ribosomal protein S6-A

Chain L8

40S ribosomal protein S8-A

Chain LD

40S ribosomal protein S11-A