J3_9NKL_007

3D structure

PDB id

9NKL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGAU*AUUUAAAGAAA*UCAC

Length

19 nucleotides

Bulged bases

9NKL|1|R1|U|1083, 9NKL|1|R1|A|1088

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NKL|1|R1|G|1055
9NKL|1|R1|G|1056
9NKL|1|R1|A|1057
9NKL|1|R1|U|1058
*
9NKL|1|R1|A|1080
9NKL|1|R1|U|1081
9NKL|1|R1|U|1082
9NKL|1|R1|U|1083
9NKL|1|R1|A|1084
9NKL|1|R1|A|1085
9NKL|1|R1|A|1086
9NKL|1|R1|G|1087
9NKL|1|R1|A|1088
9NKL|1|R1|A|1089
9NKL|1|R1|A|1090
*
9NKL|1|R1|U|1101
9NKL|1|R1|C|1102
9NKL|1|R1|A|1103
9NKL|1|R1|C|1104

Current chains

Chain R1

23S ribosomal RNA

Nearby chains

Chain 36

50S ribosomal protein L36