J3_9NKL_029

3D structure

PDB id

9NKL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UCUUGACAU*ACAG*CUUACGA

Length

20 nucleotides

Bulged bases

9NKL|1|R3|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NKL|1|R3|U|989
9NKL|1|R3|C|990
9NKL|1|R3|U|991
9NKL|1|R3|U|992
9NKL|1|R3|G|993
9NKL|1|R3|A|994
9NKL|1|R3|C|995
9NKL|1|R3|A|996
9NKL|1|R3|U|997
*
9NKL|1|R3|A|1044
9NKL|1|R3|C|1045
9NKL|1|R3|A|1046
9NKL|1|R3|G|1047
*
9NKL|1|R3|C|1210
9NKL|1|R3|U|1211
9NKL|1|R3|U|1212
9NKL|1|R3|A|1213
9NKL|1|R3|C|1214
9NKL|1|R3|G|1215
9NKL|1|R3|A|1216

Current chains

Chain R3

16S ribosomal RNA

Nearby chains

Chain sn

Small ribosomal subunit protein uS14