J3_9NL5_004
3D structure
- PDB id
- 9NL5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli pre-elongation complex without an A-site tRNA with EQ2-EttA in Hydrolytic 1 conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AC*GAUAAGCG*CGAUUU
- Length
- 16 nucleotides
- Bulged bases
- 9NL5|1|R1|U|72, 9NL5|1|R1|A|74
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9NL5|1|R1|A|56
9NL5|1|R1|C|57
*
9NL5|1|R1|G|70
9NL5|1|R1|A|71
9NL5|1|R1|U|72
9NL5|1|R1|A|73
9NL5|1|R1|A|74
9NL5|1|R1|G|75
9NL5|1|R1|C|76
9NL5|1|R1|G|77
*
9NL5|1|R1|C|109
9NL5|1|R1|G|110
9NL5|1|R1|A|111
9NL5|1|R1|U|112
9NL5|1|R1|U|113
9NL5|1|R1|U|114
Current chains
- Chain R1
- 23S ribosomal RNA
Nearby chains
- Chain 23
- Large ribosomal subunit protein uL23
- Chain 29
- Large ribosomal subunit protein uL29
- Chain 34
- 50S ribosomal protein L34
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