J3_9NLB_006

3D structure

PDB id

9NLB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-EttA in Hydrolytic 2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGAUCUAG*CUGG*CAAA

Length

16 nucleotides

Bulged bases

9NLB|1|R1|U|686, 9NLB|1|R1|A|792, 9NLB|1|R1|A|793

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLB|1|R1|U|683
9NLB|1|R1|G|684
9NLB|1|R1|A|685
9NLB|1|R1|U|686
9NLB|1|R1|C|687
9NLB|1|R1|U|688
9NLB|1|R1|A|689
9NLB|1|R1|G|690
*
9NLB|1|R1|C|772
9NLB|1|R1|U|773
9NLB|1|R1|G|774
9NLB|1|R1|G|775
*
9NLB|1|R1|C|791
9NLB|1|R1|A|792
9NLB|1|R1|A|793
9NLB|1|R1|A|794

Current chains

Chain R1

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L2

Chain 34

50S ribosomal protein L34