J3_9NLB_009

3D structure

PDB id

9NLB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-EttA in Hydrolytic 2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CAGGAUGUUG*CAUCAUUUAAAGAAA*UCACUG

Length

31 nucleotides

Bulged bases

9NLB|1|R1|U|1061

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLB|1|R1|C|1053
9NLB|1|R1|A|1054
9NLB|1|R1|G|1055
9NLB|1|R1|G|1056
9NLB|1|R1|A|1057
9NLB|1|R1|U|1058
9NLB|1|R1|G|1059
9NLB|1|R1|U|1060
9NLB|1|R1|U|1061
9NLB|1|R1|G|1062
*
9NLB|1|R1|C|1076
9NLB|1|R1|A|1077
9NLB|1|R1|U|1078
9NLB|1|R1|C|1079
9NLB|1|R1|A|1080
9NLB|1|R1|U|1081
9NLB|1|R1|U|1082
9NLB|1|R1|U|1083
9NLB|1|R1|A|1084
9NLB|1|R1|A|1085
9NLB|1|R1|A|1086
9NLB|1|R1|G|1087
9NLB|1|R1|A|1088
9NLB|1|R1|A|1089
9NLB|1|R1|A|1090
*
9NLB|1|R1|U|1101
9NLB|1|R1|C|1102
9NLB|1|R1|A|1103
9NLB|1|R1|C|1104
9NLB|1|R1|U|1105
9NLB|1|R1|G|1106

Current chains

Chain R1

23S ribosomal RNA

Nearby chains

Chain 36

50S ribosomal protein L36