J3_9NLB_022
3D structure
- PDB id
- 9NLB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli initiation complex with EQ2-EttA in Hydrolytic 2 conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGG*CUUG*CG
- Length
- 9 nucleotides
- Bulged bases
- 9NLB|1|R3|U|653
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9NLB_022 not in the Motif Atlas
- Geometric match to J3_4LFB_011
- Geometric discrepancy: 0.1173
- The information below is about J3_4LFB_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_01633.1
- Basepair signature
- cWW-F-cWW-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
9NLB|1|R3|C|586
9NLB|1|R3|G|587
9NLB|1|R3|G|588
*
9NLB|1|R3|C|651
9NLB|1|R3|U|652
9NLB|1|R3|U|653
9NLB|1|R3|G|654
*
9NLB|1|R3|C|754
9NLB|1|R3|G|755
Current chains
- Chain R3
- 16S ribosomal RNA
Nearby chains
- Chain sh
- 30S ribosomal protein S8
- Chain sl
- Small ribosomal subunit protein uS12
- Chain so
- Small ribosomal subunit protein uS15
- Chain sq
- Small ribosomal subunit protein uS17
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