J3_9NLB_027
3D structure
- PDB id
- 9NLB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli initiation complex with EQ2-EttA in Hydrolytic 2 conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUUAAUUCG*CGAAGAACCUUAC*GGCUA
- Length
- 27 nucleotides
- Bulged bases
- 9NLB|1|R3|A|975, 9NLB|1|R3|G|976, 9NLB|1|R3|A|978
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9NLB|1|R3|U|955
9NLB|1|R3|U|956
9NLB|1|R3|U|957
9NLB|1|R3|A|958
9NLB|1|R3|A|959
9NLB|1|R3|U|960
9NLB|1|R3|U|961
9NLB|1|R3|C|962
9NLB|1|R3|G|963
*
9NLB|1|R3|C|972
9NLB|1|R3|G|973
9NLB|1|R3|A|974
9NLB|1|R3|A|975
9NLB|1|R3|G|976
9NLB|1|R3|A|977
9NLB|1|R3|A|978
9NLB|1|R3|C|979
9NLB|1|R3|C|980
9NLB|1|R3|U|981
9NLB|1|R3|U|982
9NLB|1|R3|A|983
9NLB|1|R3|C|984
*
9NLB|1|R3|G|1221
9NLB|1|R3|G|1222
9NLB|1|R3|C|1223
9NLB|1|R3|U|1224
9NLB|1|R3|A|1225
Current chains
- Chain R3
- 16S ribosomal RNA
Nearby chains
- Chain si
- Small ribosomal subunit protein uS9
- Chain sj
- 30S ribosomal protein S10
- Chain sm
- 30S ribosomal protein S13
- Chain sn
- Small ribosomal subunit protein uS14
- Chain ss
- 30S ribosomal protein S19
Coloring options: