J3_9NLB_028

3D structure

PDB id

9NLB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-EttA in Hydrolytic 2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGUCUUG*CAG*CUUACGACC

Length

19 nucleotides

Bulged bases

9NLB|1|R3|U|1212, 9NLB|1|R3|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLB|1|R3|G|987
9NLB|1|R3|G|988
9NLB|1|R3|U|989
9NLB|1|R3|C|990
9NLB|1|R3|U|991
9NLB|1|R3|U|992
9NLB|1|R3|G|993
*
9NLB|1|R3|C|1045
9NLB|1|R3|A|1046
9NLB|1|R3|G|1047
*
9NLB|1|R3|C|1210
9NLB|1|R3|U|1211
9NLB|1|R3|U|1212
9NLB|1|R3|A|1213
9NLB|1|R3|C|1214
9NLB|1|R3|G|1215
9NLB|1|R3|A|1216
9NLB|1|R3|C|1217
9NLB|1|R3|C|1218

Current chains

Chain R3

16S ribosomal RNA

Nearby chains

Chain sn

Small ribosomal subunit protein uS14

Chain ss

30S ribosomal protein S19