J3_9NLE_028

3D structure

PDB id

9NLE (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-EttA in Hydrolytic 1 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UCUUG*CAG*CUUACGA

Length

15 nucleotides

Bulged bases

9NLE|1|R3|U|1212, 9NLE|1|R3|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLE|1|R3|U|989
9NLE|1|R3|C|990
9NLE|1|R3|U|991
9NLE|1|R3|U|992
9NLE|1|R3|G|993
*
9NLE|1|R3|C|1045
9NLE|1|R3|A|1046
9NLE|1|R3|G|1047
*
9NLE|1|R3|C|1210
9NLE|1|R3|U|1211
9NLE|1|R3|U|1212
9NLE|1|R3|A|1213
9NLE|1|R3|C|1214
9NLE|1|R3|G|1215
9NLE|1|R3|A|1216

Current chains

Chain R3

16S ribosomal RNA

Nearby chains

Chain sn

Small ribosomal subunit protein uS14