J3_9NLQ_024
3D structure
- PDB id
- 9NLQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli initiation complex with EQ2-YbiT in Hydrolytic 1/PtIM(a) conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UAGAAU*GGAAUACCGGUGG*CGG
- Length
- 22 nucleotides
- Bulged bases
- 9NLQ|1|R3|U|723
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9NLQ|1|R3|U|672
9NLQ|1|R3|A|673
9NLQ|1|R3|G|674
9NLQ|1|R3|A|675
9NLQ|1|R3|A|676
9NLQ|1|R3|U|677
*
9NLQ|1|R3|G|713
9NLQ|1|R3|G|714
9NLQ|1|R3|A|715
9NLQ|1|R3|A|716
9NLQ|1|R3|U|717
9NLQ|1|R3|A|718
9NLQ|1|R3|C|719
9NLQ|1|R3|C|720
9NLQ|1|R3|G|721
9NLQ|1|R3|G|722
9NLQ|1|R3|U|723
9NLQ|1|R3|G|724
9NLQ|1|R3|G|725
*
9NLQ|1|R3|C|732
9NLQ|1|R3|G|733
9NLQ|1|R3|G|734
Current chains
- Chain R3
- 16S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L2
- Chain sf
- 30S ribosomal protein S6, non-modified isoform
- Chain sk
- Small ribosomal subunit protein uS11
- Chain so
- Small ribosomal subunit protein uS15
- Chain sr
- 30S ribosomal protein S18
- Chain su
- Small ribosomal subunit protein bS21
Coloring options: