J3_9O2Y_018
3D structure
- PDB id
- 9O2Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (R) beta-2-hydroxy-BocLysine acid charged NH-tRNAPyl
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.14 Å
Loop
- Sequence
- GC*GCGAAAAGAAC*GAGUGAAAAAGAACC
- Length
- 28 nucleotides
- Bulged bases
- 9O2Y|1|a|A|504, 9O2Y|1|a|A|508
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9O2Y|1|a|G|30
9O2Y|1|a|C|31
*
9O2Y|1|a|G|474
9O2Y|1|a|C|475
9O2Y|1|a|G|476
9O2Y|1|a|A|477
9O2Y|1|a|A|478
9O2Y|1|a|A|479
9O2Y|1|a|A|480
9O2Y|1|a|G|481
9O2Y|1|a|A|482
9O2Y|1|a|A|483
9O2Y|1|a|C|484
*
9O2Y|1|a|G|496
9O2Y|1|a|A|497
9O2Y|1|a|G|498
9O2Y|1|a|U|499
9O2Y|1|a|G|500
9O2Y|1|a|A|501
9O2Y|1|a|A|502
9O2Y|1|a|A|503
9O2Y|1|a|A|504
9O2Y|1|a|A|505
9O2Y|1|a|G|506
9O2Y|1|a|A|507
9O2Y|1|a|A|508
9O2Y|1|a|C|509
9O2Y|1|a|C|510
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain p
- 50S ribosomal protein L20
- Chain r
- Large ribosomal subunit protein uL22
- Chain t
- 50S ribosomal protein L24
Coloring options: