J3_9O2Y_019
3D structure
- PDB id
- 9O2Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (R) beta-2-hydroxy-BocLysine acid charged NH-tRNAPyl
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.14 Å
Loop
- Sequence
- CCUG*CGAUAGUGAACCAGUAC*GGAAAG
- Length
- 27 nucleotides
- Bulged bases
- 9O2Y|1|a|U|34, 9O2Y|1|a|U|448, 9O2Y|1|a|C|456
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9O2Y|1|a|C|32
9O2Y|1|a|C|33
9O2Y|1|a|U|34
9O2Y|1|a|G|35
*
9O2Y|1|a|C|445
9O2Y|1|a|G|446
9O2Y|1|a|A|447
9O2Y|1|a|U|448
9O2Y|1|a|A|449
9O2Y|1|a|G|450
9O2Y|1|a|U|451
9O2Y|1|a|G|452
9O2Y|1|a|A|453
9O2Y|1|a|A|454
9O2Y|1|a|C|455
9O2Y|1|a|C|456
9O2Y|1|a|A|457
9O2Y|1|a|G|458
9O2Y|1|a|U|459
9O2Y|1|a|A|460
9O2Y|1|a|C|461
*
9O2Y|1|a|G|468
9O2Y|1|a|G|469
9O2Y|1|a|A|470
9O2Y|1|a|A|471
9O2Y|1|a|A|472
9O2Y|1|a|G|473
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L34
- Chain e
- Large ribosomal subunit protein uL4
- Chain p
- 50S ribosomal protein L20
- Chain s
- 50S ribosomal protein L23
Coloring options: